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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29043648_29047052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29043648 - 29047052

Intron Length:

3405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTACTGTTAATT

Flanking Amino Acid:

DRFYLGYPALGLLKFCTVGF

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

84.4

0.85

34.5

Major PPT

100

1.12

0.4

100

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

50.6

0.1

2.1

69.41

Associated Gene:

Gene:

TM2D1

Ensembl Gene ID:

ENSAPLG00000003403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003462

29035946 - 29054020

18075