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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29053138_29053835_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

29053138 - 29053835

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

GCA|ATATCCTGA

5'SS Class:

minor

3'SS Sequence:

CAATTACCTGAAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTCCTCAATT

Flanking Amino Acid:

PPKCDELRLGQYMCDEPKID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

29.6

-1.2

3.3

34.5

38.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

-0.8

3.1

50.3

38.1

Minor 5ss

74.1

0.8

1.7

76.5

Minor BPS

82.5

1.1

1.3

96.5

28.9

Associated Gene:

Gene:

TM2D1

Ensembl Gene ID:

ENSAPLG00000003403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003462

29035946 - 29054020

18075