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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29063765_29065109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29063765 - 29065109

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTCTATTTTACT

Flanking Amino Acid:

FNAIIQRMAKGRQIESIKIE

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

75.6

0.58

0.9

70.4

39.9

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

60.9

0.42

1.8

80.82

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002936

29062282 - 29091683

29402