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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29067268_29068914_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29067268 - 29068914

Intron Length:

1647

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCTGGATAC

5'SS Class:

weak_major

3'SS Sequence:

GGCCATGTTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAATT

Flanking Amino Acid:

TSSVLLNFELYVELINDGSG

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.4

49.8

43.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

53.8

0.09

1.2

51.6

41.6

Minor 5ss

25.3

-2.8

38.1

40.2

Minor BPS

76.9

0.92

1.4

92.73

28.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002936

29062282 - 29091683

29402