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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29083301_29086093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29083301 - 29086093

Intron Length:

2793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GTACAATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTATGCTGTACA

Flanking Amino Acid:

NLLGPEYEVMVVNVDMPITD

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.4

31.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

67.2

0.39

42.7

Minor 5ss

48.1

-0.2

2.5

63.2

43.8

Minor BPS

49.2

-0

2.2

69.07

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002936

29062282 - 29091683

29402