Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_29193084_29196220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29193084 - 29196220

Intron Length:

3137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

CAGCATTTCATT

Flanking Amino Acid:

KNAYGSIILQVVADTNISAI

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.4

39.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

72.9

0.52

0.8

72.7

32.1

Minor 5ss

42.2

-0.9

3.1

55.7

48.5

Minor BPS

43.8

-0.4

1.8

54.88

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043603

29143646 - 29199941

56296