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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29196325_29197963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29196325 - 29197963

Intron Length:

1639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

ATTGTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GTTATTCTAAGT

Flanking Amino Acid:

SSSEHASEDPEAPQPKIITL

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.4

45.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

0.7

0.9

77.4

41.2

Minor 5ss

39.1

-1.2

46.9

42.4

Minor BPS

48.1

-0

1.9

69.54

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043603

29143646 - 29199941

56296