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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29198088_29199794_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29198088 - 29199794

Intron Length:

1707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

TTGCCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CAGCCGCTAACG

Flanking Amino Acid:

PIYVKTIFAKGAAADDGRLK

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.4

41.9

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

79.6

0.67

0.9

73.5

35.9

Minor 5ss

56.3

0.21

2.5

76.3

39.1

Minor BPS

42.5

-0.7

2.3

46.66

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043603

29143646 - 29199941

56296