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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2922326_2925539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2922326 - 2925539

Intron Length:

3214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCAATAACTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATAACT

Flanking Amino Acid:

LAAFAAVYISLFMLLFKYQG

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

83.5

29.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

63.4

0.3

57.1

42.4

Minor 5ss

32.4

-2

2.8

43.1

43.9

Minor BPS

71.9

0.77

1.9

94.76

31.4

Associated Gene:

Gene:

PLPPR4

Ensembl Gene ID:

ENSAPLG00000013020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013573

2915036 - 2926904

11869