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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29360789_29361797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29360789 - 29361797

Intron Length:

1009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

GCATTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTGCATTTATT

Flanking Amino Acid:

FMSAWHNMKYSWVLKTKTYF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

71.7

33.7

Major BPS

76.3

0.65

67.3

39.3

Major PPT

0.52

0.9

70.5

39.7

Minor 5ss

34.2

-1.8

3.2

45.6

43.6

Minor BPS

56.7

0.29

81.12

40.6

Associated Gene:

Gene:

ATG4C

Ensembl Gene ID:

ENSAPLG00000015314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035392

29357935 - 29384871

26937

ENSAPLT00000015973

29357935 - 29383771

25837