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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29362777_29365527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29362777 - 29365527

Intron Length:

2751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGCATCTTAATG

Flanking Amino Acid:

QGLMLHFLGRAWVWPDALDI

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

82.4

0.73

0.8

77.1

31.6

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

61.8

0.23

1.4

60.2

42.1

Associated Gene:

Gene:

ATG4C

Ensembl Gene ID:

ENSAPLG00000015314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035392

29357935 - 29384871

26937

ENSAPLT00000032715

29361315 - 29384871

23557

ENSAPLT00000015973

29357935 - 29383771

25837