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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29365859_29367823_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29365859 - 29367823

Intron Length:

1965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATGAT

U12 Branch Point Sequence:

GTGTTTGTACTT

Flanking Amino Acid:

YGPAVVAHILRKAVEEARDP

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.6

30.5

Major BPS

60.7

0.27

1.2

51.5

43.9

Major PPT

71.2

0.48

0.9

70.2

40.4

Minor 5ss

33.4

-1.9

3.6

46.9

48.4

Minor BPS

44.9

-0.3

2.1

62.99

42.5

Associated Gene:

Gene:

ATG4C

Ensembl Gene ID:

ENSAPLG00000015314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035392

29357935 - 29384871

26937

ENSAPLT00000032715

29361315 - 29384871

23557

ENSAPLT00000015973

29357935 - 29383771

25837