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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29369523_29374335_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29369523 - 29374335

Intron Length:

4813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATTATTT

Flanking Amino Acid:

TNTDYLEFVKGILSLEYCVG

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.9

0.56

0.9

69.8

36.6

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

49.8

0.06

73.99

Associated Gene:

Gene:

ATG4C

Ensembl Gene ID:

ENSAPLG00000015314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035392

29357935 - 29384871

26937

ENSAPLT00000032715

29361315 - 29384871

23557

ENSAPLT00000015973

29357935 - 29383771

25837