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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29436081_29438122_R

Intron Information:

Intron Rank:

130604

Intron Class:

major

Intron Phase:

Intron Coordinates:

29436081 - 29438122

Intron Length:

2042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTACC

5'SS Class:

major

3'SS Sequence:

AGTCTTCTCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTGTTTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

72.7

36.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

71.5

0.48

0.8

66.2

35.1

Minor 5ss

33.5

-1.9

2.4

37.2

Minor BPS

58.1

0.34

2.1

82.48

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022599

29433564 - 29489382

55819

ENSAPLT00000032353

29433564 - 29438700

5137

ENSAPLT00000032231

29433564 - 29439474

5911