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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29491966_29519846_R

Intron Information:

Intron Rank:

129079

Intron Class:

major

Intron Phase:

Intron Coordinates:

29491966 - 29519846

Intron Length:

27881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GCCATCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

AAGCCCTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

75.4

0.57

0.9

68.5

37.2

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

61.7

0.45

1.6

73.47

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036542

29491845 - 29526895

35051

ENSAPLT00000019345

29491845 - 29539774

47930