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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29519960_29526714_R

Intron Information:

Intron Rank:

129082

Intron Class:

major

Intron Phase:

Intron Coordinates:

29519960 - 29526714

Intron Length:

6755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTATGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTGCTTTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.8

0.58

0.9

74.3

35.1

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

52.9

0.17

1.4

66.4

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036542

29491845 - 29526895

35051