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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29593815_29594338_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29593815 - 29594338

Intron Length:

524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTCTACCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TCTTCTTCTACC

Flanking Amino Acid:

VHEKSILLVSVPVCLILNEI

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

76.2

34.7

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

80.2

0.68

0.8

77.9

30.5

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

0.2

1.9

70.67

Associated Gene:

Gene:

ALG6

Ensembl Gene ID:

ENSAPLG00000014868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015538

29574233 - 29595218

20986