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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29594408_29594551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29594408 - 29594551

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

TCTGCTTTAACA

Flanking Amino Acid:

ATWFLLVSTFSMLPLLLKDG

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

64.9

0.37

29.8

Major PPT

77.2

0.61

0.9

72.9

36.2

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

75.2

0.79

1.3

78.6

38.6

Associated Gene:

Gene:

ALG6

Ensembl Gene ID:

ENSAPLG00000014868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015538

29574233 - 29595218

20986