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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29610699_29611831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29610699 - 29611831

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGGTTT

5'SS Class:

major

3'SS Sequence:

GTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TGTCTTTTAACT

Flanking Amino Acid:

KTRASLTNLQALEGSRELEN

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

72.1

39.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

91.7

0.94

0.7

84.6

Minor 5ss

44.2

-0.6

3.2

64.6

46.9

Minor BPS

75.5

0.88

1.1

85.79

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015436

29601015 - 29626267

25253

ENSAPLT00000017879

29601015 - 29619539

18525