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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29638600_29639046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29638600 - 29639046

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTGGGGATAT

Flanking Amino Acid:

IKPLNLRQVEGKSCHWLSVD

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

87.1

0.83

0.7

86.1

27.7

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

33.3

-1.1

2.8

61.64

47.8

Associated Gene:

Gene:

EFCAB7

Ensembl Gene ID:

ENSAPLG00000014663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015298

29628870 - 29648788

19919