Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_29647523_29648363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29647523 - 29648363

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TCCATTTCACCT

Flanking Amino Acid:

AVEVAPKSMTVSQHVMPLNE

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

81.9

32.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

77.5

0.62

0.9

37.2

Minor 5ss

44.4

-0.6

3.2

66.3

44.6

Minor BPS

45.4

-0.2

1.8

59.53

44.5

Associated Gene:

Gene:

EFCAB7

Ensembl Gene ID:

ENSAPLG00000014663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015298

29628870 - 29648788

19919