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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29663757_29664181_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
29663757 - 29664181

Intron Length:
425

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAATGGG

5'SS Class:
major

3'SS Sequence:
TTGTCCTCGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACGTGAG

U12 Branch Point Sequence:
GGGACGTGAGCT

Flanking Amino Acid:
DFGAAFDGDGDRNMILGKHG

Intron Amino Acid Position:
292

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.2
0.57
1.1
60.4
44.7

Major BPS
44.4
-0.3
1.6
36.8
42.3

Major PPT
72.4
0.5
1
66.2
40.7

Minor 5ss
31
-2.2
3.2
31.5
42.8

Minor BPS
40.8
-0.6
2.2
55.57
45.6

Associated Gene:

Gene:
PGM1

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29650569 - 29670242
19674