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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29825375_29825960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29825375 - 29825960

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTGCCTTGAACT

Flanking Amino Acid:

GIPMADPINKNHKCYNSTGV

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

68.5

0.66

1.4

82.43

38.7

Associated Gene:

Gene:

ROR1

Ensembl Gene ID:

ENSAPLG00000013960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040384

29686949 - 29835599

148651

ENSAPLT00000014563

29746621 - 29835599

88979