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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29826207_29830059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29826207 - 29830059

Intron Length:

3853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATTGCT

5'SS Class:

major

3'SS Sequence:

TCCCTTGAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TTTCCCTTGAAC

Flanking Amino Acid:

KSELCDVPACDSKDSKEKNK

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

73.4

35.3

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

64.6

0.33

58.3

41.1

Minor 5ss

35.5

-1.6

3.2

47.7

43.1

Minor BPS

0.71

1.4

81.03

32.8

Associated Gene:

Gene:

ROR1

Ensembl Gene ID:

ENSAPLG00000013960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040384

29686949 - 29835599

148651

ENSAPLT00000014563

29746621 - 29835599

88979