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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29830272_29834174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29830272 - 29834174

Intron Length:

3903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTTTTTCTAACA

Flanking Amino Acid:

MSMLNAYKPKSKAKELPLSA

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

84.5

0.78

0.8

77.2

36.4

Minor 5ss

41.5

-0.9

3.1

55.8

48.4

Minor BPS

64.8

0.46

1.6

76.34

34.4

Associated Gene:

Gene:

ROR1

Ensembl Gene ID:

ENSAPLG00000013960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040384

29686949 - 29835599

148651

ENSAPLT00000014563

29746621 - 29835599

88979