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Intron Name: Anas_platyrhynchos_platyrhynchos_8_29988303_29990932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29988303 - 29990932

Intron Length:

2630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAATACCT

5'SS Class:

major

3'SS Sequence:

TTTTATGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTGCTCTGAATT

Flanking Amino Acid:

WGRSGTESDHGYSTMSPQED

Intron Amino Acid Position:

1213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

62.2

42.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

85.2

0.79

0.9

77.1

41.6

Minor 5ss

35.2

-1.7

3.2

50.9

44.9

Minor BPS

57.1

0.3

1.5

69.6

41.8

Associated Gene:

Gene:

CACHD1

Ensembl Gene ID:

ENSAPLG00000013355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044903

29901183 - 29991171

89989

ENSAPLT00000027609

29897777 - 29991394

93618

ENSAPLT00000013932

29897777 - 29991394

93618