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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30012899_30021013_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30012899 - 30021013

Intron Length:

8115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGTCACAC

5'SS Class:

weak_major

3'SS Sequence:

TCGTTTACGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

ATTTCGTTTACG

Flanking Amino Acid:

KRTGKKLKSSEEFEELVRAY

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.11

1.2

38.1

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

66.5

0.37

67.1

39.2

Minor 5ss

38.9

-1.2

3.1

45.7

Minor BPS

54.7

2.4

69.91

43.1

Associated Gene:

Gene:

RAVER2

Ensembl Gene ID:

ENSAPLG00000013160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013704

30004073 - 30039940

35868