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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30023657_30024922_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30023657 - 30024922

Intron Length:

1266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCAATTTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TATCTCTCAATT

Flanking Amino Acid:

LAALIAAQRMMRNNRKGLLP

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

55.5

0.13

1.7

66.4

38.5

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

64.1

0.52

1.5

78.84

37.1

Associated Gene:

Gene:

RAVER2

Ensembl Gene ID:

ENSAPLG00000013160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013704

30004073 - 30039940

35868