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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30033638_30034013_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30033638 - 30034013

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGCCAGCAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTATGT

Flanking Amino Acid:

ASVLPGICLPASSPPQQTGL

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

50.5

0.01

1.1

49.4

37.8

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

53.9

0.2

2.1

78.51

43.3

Associated Gene:

Gene:

RAVER2

Ensembl Gene ID:

ENSAPLG00000013160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013704

30004073 - 30039940

35868