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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30043686_30044649_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30043686 - 30044649

Intron Length:

964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACACAG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTGCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CATCCTTTAAAA

Flanking Amino Acid:

LPRPPNCPEEVDQLMRKCWI

Intron Amino Acid Position:

1120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

62.5

43.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

81.6

0.71

0.9

77.9

36.6

Minor 5ss

36.9

-1.5

3.1

47.4

Minor BPS

63.1

0.41

1.4

67.35

38.7

Associated Gene:

Gene:

JAK1

Ensembl Gene ID:

ENSAPLG00000012047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012638

30042584 - 30071722

29139