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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30044761_30045115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30044761 - 30045115

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

GCTCTTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

GCTCTTTCCACA

Flanking Amino Acid:

YCDSESSPMAEFLKMIGPTQ

Intron Amino Acid Position:

1083

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

70.3

40.5

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

77.5

0.62

0.8

71.8

32.8

Minor 5ss

36.6

-1.5

3.4

54.8

43.5

Minor BPS

44.2

-0.4

1.9

52.9

39.6

Associated Gene:

Gene:

JAK1

Ensembl Gene ID:

ENSAPLG00000012047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012638

30042584 - 30071722

29139