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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30046781_30047392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30046781 - 30047392

Intron Length:

612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAATCTT

5'SS Class:

major

3'SS Sequence:

ACACTCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGCAAATTAAAC

Flanking Amino Acid:

VKYKGICTEDGGNGIKLIME

Intron Amino Acid Position:

944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

75.5

40.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

72.8

0.51

0.8

69.9

35.6

Minor 5ss

-1.1

3.2

59.5

44.9

Minor BPS

46.2

-0.3

1.9

55.98

41.2

Associated Gene:

Gene:

JAK1

Ensembl Gene ID:

ENSAPLG00000012047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012638

30042584 - 30071722

29139