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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30048159_30049259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30048159 - 30049259

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCACTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTTTTTTCCACT

Flanking Amino Acid:

MRDINKLEEQNPDIVSEKKP

Intron Amino Acid Position:

848

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

78.7

0.65

0.8

70.1

35.3

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

58.1

0.34

83.3

38.2

Associated Gene:

Gene:

JAK1

Ensembl Gene ID:

ENSAPLG00000012047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012638

30042584 - 30071722

29139