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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30052159_30052902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30052159 - 30052902

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CACTTTCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CACTTTCTAACA

Flanking Amino Acid:

LDPSHRDISLAFFETASMMR

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

84.1

33.5

Major BPS

81.8

0.79

1.1

34.5

Major PPT

73.9

0.54

0.9

69.3

35.4

Minor 5ss

-2.3

4.1

47.1

42.6

Minor BPS

51.8

0.05

1.7

60.14

40.2

Associated Gene:

Gene:

JAK1

Ensembl Gene ID:

ENSAPLG00000012047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012638

30042584 - 30071722

29139