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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30056584_30057266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30056584 - 30057266

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GCACTCTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGCAC

U12 Branch Point Sequence:

TTTTTCGCACTC

Flanking Amino Acid:

MTVTCFEGSEMMNSSIQYKN

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

43.5

Major BPS

60.1

0.25

1.4

71.3

36.7

Major PPT

71.7

0.49

0.9

61.8

39.7

Minor 5ss

32.5

-2

3.1

40.5

45.6

Minor BPS

45.4

-0.3

2.3

65.51

Associated Gene:

Gene:

JAK1

Ensembl Gene ID:

ENSAPLG00000012047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012638

30042584 - 30071722

29139