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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30061735_30062905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30061735 - 30062905

Intron Length:

1171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTGTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

CAGACCTGATAT

Flanking Amino Acid:

ANSLEYIFAQGQYDLVKGLA

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

0.5

59.3

39.1

Major PPT

69.7

0.44

1.1

74.7

33.9

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

44.6

-0.3

1.8

56.34

45.2

Associated Gene:

Gene:

JAK1

Ensembl Gene ID:

ENSAPLG00000012047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012638

30042584 - 30071722

29139