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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3009477_3011538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3009477 - 3011538

Intron Length:

2062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TTTCAATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

ATTTCTCTAAAA

Flanking Amino Acid:

LLKERIQAITDKRKLQEEIT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

36.6

Major BPS

76.9

0.67

1.2

31.9

Major PPT

83.7

0.76

0.8

77.6

35.3

Minor 5ss

37.5

-1.4

3.3

56.3

41.9

Minor BPS

62.6

0.39

1.7

76.02

34.5

Associated Gene:

Gene:

PALMD

Ensembl Gene ID:

ENSAPLG00000013197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029142

2984428 - 3029089

44662

ENSAPLT00000013770

3009431 - 3033191

23761