Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30114649_30115781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30114649 - 30115781

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCGCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

TGCCGCTCACCC

Flanking Amino Acid:

KRRAEHWLLDGFPRTLGQAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

68.1

0.41

0.9

61.5

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

42.7

-0.5

2.1

52.77

44.6

Associated Gene:

Gene:

AK4

Ensembl Gene ID:

ENSAPLG00000007058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007315

30109915 - 30117158

7244