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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30141355_30141460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30141355 - 30141460

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTACCCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTCTTCTTACCC

Flanking Amino Acid:

DISYITSRIIVMSFPAEGVE

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

75.2

0.57

0.8

66.3

35.6

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

69.4

0.59

1.6

77.35

39.1

Associated Gene:

Gene:

DNAJC6

Ensembl Gene ID:

ENSAPLG00000015954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028127

30140237 - 30159167

18931

ENSAPLT00000016661

30129431 - 30161383

31953