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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30141610_30145421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30141610 - 30145421

Intron Length:

3812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ACAATTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

CTTTTGTTCACT

Flanking Amino Acid:

YYRSAKFHNRVSECSWPVRQ

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

75.5

0.63

40.9

Major PPT

70.2

0.45

0.9

62.7

38.7

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

51.5

0.13

2.4

78.66

44.1

Associated Gene:

Gene:

DNAJC6

Ensembl Gene ID:

ENSAPLG00000015954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028127

30140237 - 30159167

18931

ENSAPLT00000017985

30141461 - 30162226

20766

ENSAPLT00000016661

30129431 - 30161383

31953