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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30147086_30148246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30147086 - 30148246

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

TCTCTGCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

ATTTCAGTAACG

Flanking Amino Acid:

PGIVLWPSHRRYIGYICDLI

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

38.3

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

79.6

0.67

0.8

73.2

31.7

Minor 5ss

36.4

-1.5

3.7

54.5

49.7

Minor BPS

55.5

0.03

2.3

71.16

41.6

Associated Gene:

Gene:

DNAJC6

Ensembl Gene ID:

ENSAPLG00000015954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017985

30141461 - 30162226

20766

ENSAPLT00000016661

30129431 - 30161383

31953

ENSAPLT00000028127

30140237 - 30159167

18931