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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30148442_30148844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30148442 - 30148844

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CATCCTCTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GGGAGCTTAACT

Flanking Amino Acid:

LTTSQEYERMKEYRVQEGKV

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

34.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

63.4

0.3

62.9

31.7

Minor 5ss

36.8

-1.5

2.9

43.8

Minor BPS

56.9

0.29

1.9

70.48

45.7

Associated Gene:

Gene:

DNAJC6

Ensembl Gene ID:

ENSAPLG00000015954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028127

30140237 - 30159167

18931

ENSAPLT00000017985

30141461 - 30162226

20766

ENSAPLT00000016661

30129431 - 30161383

31953