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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30150980_30151096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30150980 - 30151096

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

QEHQDTLALAGKCPTDSPPD

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.3

34.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.6

0.64

0.9

72.2

Minor 5ss

39.2

-1.2

3.4

56.9

47.4

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

DNAJC6

Ensembl Gene ID:

ENSAPLG00000015954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028127

30140237 - 30159167

18931

ENSAPLT00000017985

30141461 - 30162226

20766

ENSAPLT00000016661

30129431 - 30161383

31953