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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30153708_30155047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30153708 - 30155047

Intron Length:

1340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGCG

5'SS Class:

major

3'SS Sequence:

TCATTCTGCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TTATACGTACTC

Flanking Amino Acid:

PTVHSDPFHMASSTPTVSIQ

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

63.4

41.5

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

69.8

0.45

0.9

69.4

36.6

Minor 5ss

30.3

-2.3

3.2

31.6

42.2

Minor BPS

-0.3

2.3

63.88

41.9

Associated Gene:

Gene:

DNAJC6

Ensembl Gene ID:

ENSAPLG00000015954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028127

30140237 - 30159167

18931

ENSAPLT00000017985

30141461 - 30162226

20766

ENSAPLT00000016661

30129431 - 30161383

31953