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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30160410_30161281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30160410 - 30161281

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

CACTTGGTAAAT

Flanking Amino Acid:

RAVLVVHPDKATGQPYEQYA

Intron Amino Acid Position:

953

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

77.5

0.62

0.9

69.7

41.5

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

40.4

-0.6

2.5

57.08

45.7

Associated Gene:

Gene:

DNAJC6

Ensembl Gene ID:

ENSAPLG00000015954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016661

30129431 - 30161383

31953

ENSAPLT00000017985

30141461 - 30162226

20766