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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3017215_3026009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3017215 - 3026009

Intron Length:

8795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTAG

5'SS Class:

major

3'SS Sequence:

ATTGTAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TCTTCCTGATAT

Flanking Amino Acid:

RTHELEQDIFRLEKEIEALE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.6

41.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

75.1

0.56

67.7

Minor 5ss

34.7

-1.7

3.5

45.4

49.7

Minor BPS

58.1

0.33

1.9

78.31

43.5

Associated Gene:

Gene:

PALMD

Ensembl Gene ID:

ENSAPLG00000013197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029142

2984428 - 3029089

44662

ENSAPLT00000013770

3009431 - 3033191

23761