Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_30198661_30200388_R

Intron Information:

Intron Rank:

133529

Intron Class:

major

Intron Phase:

Intron Coordinates:

30198661 - 30200388

Intron Length:

1728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

AATTTACCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TCATAATGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

75.3

0.57

0.9

67.9

38.1

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

48.7

-0

1.9

68.26

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027467

30198105 - 30209386

11282