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Intron Name: Anas_platyrhynchos_platyrhynchos_8_30203177_30209306_R

Intron Information:

Intron Rank:

133532

Intron Class:

major

Intron Phase:

Intron Coordinates:

30203177 - 30209306

Intron Length:

6130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GAAGCATTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

81.6

31.4

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

85.8

0.81

0.7

77.3

31.4

Minor 5ss

43.6

-0.7

2.6

59.8

44.7

Minor BPS

48.7

-0.1

1.8

56.36

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027467

30198105 - 30209386

11282