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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3027238_3027956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3027238 - 3027956

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCTT

5'SS Class:

major

3'SS Sequence:

TTTCTTTCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAA

U12 Branch Point Sequence:

TTTCTTTCAACA

Flanking Amino Acid:

TVTDDEEKRKALFAMEIKVE

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

66.4

44.6

Major BPS

63.3

0.33

1.1

55.4

41.7

Major PPT

84.2

0.77

0.8

81.3

29.2

Minor 5ss

35.7

-1.6

3.7

56.5

47.7

Minor BPS

65.3

0.48

1.5

76.67

Associated Gene:

Gene:

PALMD

Ensembl Gene ID:

ENSAPLG00000013197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029142

2984428 - 3029089

44662

ENSAPLT00000013770

3009431 - 3033191

23761