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Intron Name: Anas_platyrhynchos_platyrhynchos_8_3029046_3033147_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3029046 - 3033147

Intron Length:

4102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

AAGACTTAAAGT

Flanking Amino Acid:

GDGTEDPSLTALRMRMAKLG

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

42.4

Major BPS

0.47

69.9

32.6

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

34.1

-1.8

3.6

47.1

48.3

Minor BPS

46.3

-0.2

1.9

59.77

43.8

Associated Gene:

Gene:

PALMD

Ensembl Gene ID:

ENSAPLG00000013197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013770

3009431 - 3033191

23761